Metadata for rockhopper in main

---
Type: desktop-application
ID: edu.wellesley.cs.rockhoppergui
Package: rockhopper
ProjectLicense: GPL-3.0-or-later
Name:
  C: rockhoppergui
Summary:
  C: System for analyzing bacterial RNA-seq data
Description:
  C: |-
    <p>Rockhopper is a comprehensive and user-friendly system for computational analysis of bacterial RNA-seq
    data. As input, Rockhopper takes RNA sequencing reads output by high-throughput sequencing technology
    (FASTQ, QSEQ, FASTA, SAM, or BAM files). Rockhopper supports the following tasks: Reference based transcript
    assembly (when one or more reference genomes are available)Aligning reads to genomesAssembling transcriptsIdentifying
    transcript boundaries and novel transcripts such as small RNAsDe novo transcript assembly (when reference
    genomes are unavailable)Normalizing data from different experimentsQuantifying transcript abundanceTesting
    for differential gene expressionCharacterizing operon structuresVisualizing results in a genome browser</p>
Categories:
- Science
- Biology
- DataVisualization
Keywords:
  C:
  - genomics
  - bacterial
  - RNA
  - visualization
Icon:
  cached:
  - name: rockhopper_rockhopper.png
    width: 48
    height: 48
  - name: rockhopper_rockhopper.png
    width: 64
    height: 64
  stock: rockhopper
Launchable:
  desktop-id:
  - rockhoppergui.desktop
ContentRating:
  oars-1.0: {}